Browse of TCMCG006C57250 protein

CDS

Accession Number	TCMCG006C57250
gbkey	CDS
Protein Id	XP_013722805.1
Location	complement(join(727791..727822,727910..728129,728225..728620,728691..729027,729177..729286,729359..729652,730106..730412,730497..730687,730764..731413,731547..731602,731876..732018,732117..732218,732300..732364,732758..733391,733467..733624,733704..733803,733882..734121,734248..734556,734634..735971))
Gene	LOC106426639
GeneID	106426639
Organism	Brassica napus

Protein

Length	1893aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013867351.2
Definition	vacuolar protein sorting-associated protein 8 homolog [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	U
Description	Vacuolar protein sorting-associated protein 8 homolog
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko04131        [VIEW IN KEGG]
KEGG_ko	ko:K20178        [VIEW IN KEGG]
EC	-
KEGG_Pathway	ko04138        [VIEW IN KEGG] map04138        [VIEW IN KEGG]
GOs	GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005768        [VIEW IN EMBL-EBI] GO:0005769        [VIEW IN EMBL-EBI] GO:0006810        [VIEW IN EMBL-EBI] GO:0006906        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0016050        [VIEW IN EMBL-EBI] GO:0016192        [VIEW IN EMBL-EBI] GO:0031410        [VIEW IN EMBL-EBI] GO:0031982        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0033263        [VIEW IN EMBL-EBI] GO:0034058        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044433        [VIEW IN EMBL-EBI] GO:0044440        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0048284        [VIEW IN EMBL-EBI] GO:0051179        [VIEW IN EMBL-EBI] GO:0051234        [VIEW IN EMBL-EBI] GO:0061024        [VIEW IN EMBL-EBI] GO:0061025        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0090174        [VIEW IN EMBL-EBI] GO:0097708        [VIEW IN EMBL-EBI] GO:0099023        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGAAGAACTCCCACGTGGAACTCGATCTCGACTCCTTTCTAGTATCCGACTCCGACTCCGAACCCGATTCGGATCCTTCCTCCGTTCCTCACCGTACAATCGACGAAATCCTCAACGCCTCCAGCTCTTCATCTCCCTCTTCTTCTCCCCCGCCATCCCCGCCGTTAGTCAGAGATCAACTTAACCGCCGGAATCAAAACGCTGCGGCGAGACCTCAATCCGAAATCCATCGCGTAACCGATCCGGCGCGGCGGAATCCGGCGCCGAGTGCTTCGTTGAGGCAGTTGCCGTTGCCGTCGCTGTTCGCGGGAGTGAGGTCCAATGTGAAGCCCGGCGCGGCGCTTGCGGCGGCTGTGGCGGCTTCCAGATTGGTGCCTACGCCGCACGCCGCTATCATCAAGTCGAGGAGAGCTAGTAGCGAGTTGCTTTTGGGCGGCGCTGCTGGAGAATCTAGTTCGAATCAAGATGAAGATGATCATGAAGTTTTATCATCAAATGGTGATTCCGCTGGAATTGAGAATCCTTCTTTTGATAGAGAATCTCGCTTAGAGGATGAGGATGATGGAGTTGGACTCTCAAGTCAAGATAAGGAATCTCAAGTAATGGAAGTTCAAGCTAGTGATATTGATGATTATGAGAAAAACTCAAAGCCTGACTTAGTAACTGCCTCCTCTGGTGTTGATGTTGAAGAAGAAGTCTCTTCAGAACAAGAGGGGATGGCCGCAACGGAAGCTGGAGATGCTGACACAATGTTTGTAGCTCTTTCTGCGGACTCTTTGGAGTCTCAACATTTGAATGATTCTGATGATGTTAAGGTAAGAAATGATGAGGAGTCAAGTGCTGGAGATGTTAAGAATGATGATTCAGATTTTAAAGAAGAGGAGGAGGGAGGTGATGATGCTCTTGTTCCTGATGATGGGAGCTCAGTGTCCGGCATTTCGGAGCTTGTAGAAGAGAGGATTGAGGAGATGGAAAAAGAAAGGATGAGTAAAAGGGAGAAGCTAAAGTCACGATCTTTTAGGAAGCAGCTTGTCTTGGCTGAAGAGTTTGAGAAGAAACAAGCCTATACTGGTTTGCATTGGGAGGAAGGAGCTGCTGCTCAGCCAATGAGACTTGAGGGTGTTAAGATTGGTTCGACGAATCTAGGTTACTTTGATGTTGATGCTAGCAATATCGTCAGCCGAACCATTTCTTCGCAGGCATTTAAGCGAGACCATGGTTCTCCGCAGGTTTTGGCTGTTCATTTGAATTTTATCGCGGTGGGTACGTCCAAGGGGGTCATCGTCGTTGTACCAAGTAAATATTCTTCCGATACTGCAGATCAGATGGAATCAAAGATGATTTGGCTTGGTTTACAAGGAGAAAGATCGCATTCTCCAGTTACCTCAGTTTGCTTCAATCAGCAAGGGGGACTCCTGCTAGCTGGGTATGGTGATGGACATGTTACAGTTTGGGACGTGCAGAGAGCGTCGGCAGCAAAAGTGATCACCGAACACACTGCACCAGTAGTATATGCGTTTTTTCTAGGCCGGGATTCTCAAGGCTCTCGCATATTCAAAGTAATTACAAGTGACAATAAGGGTGTCGTTTTCAAACATACTTTCTCTTGGACTCTGCTGTTGAATATGTATACAGTAAAAACGCAGTGTCTTCTCGATGGACAAAAAAATGGAATGGTCCTATCGGCATCACCTCTTCCTGATGAATATTTTGGAAGCTCCTTGGCCTCTTCTAAGGCGGGTAACACTGCAACTCCATCCAGCAGTATAAGCAGCATGGTGGGGGGTGTTGTTGGGGTTGATTCAAGTTGGAAGCTCTTTAATGAGGATGCGTCAGCGGTGGAAGAAGGGGTTGTCGTATTTGTAACCTATCAAACTGTACTGGTGGTAAAGCTCATTCCAGATCTGGAGGTGTATGCACAACTTCCTAGGCCTGAAGGGGTTCGGGAGGGTTCCATGCCATACACGGCCTGGAAATGTTCAATGGAAAACTCTTCTAAGGAGGCTAAAGATAGGGTTTCGTTTCTTGCCATTGCGTGGGATCGTAGAGTTCAGGTTGCCAAGTTGGTAAAATCAAAATTAAAGGAATGTGCCAAATGGTCGCTTGACAGTGCTGCTATTGGTGTGGTTTGGCTGGATGATCAGTTGCTGGTGATCCCAACTGTGACGGGCCATTTATATCTGTTCACAAGAGATGGTGTGGTAATTCACCAGACAAGCTTTTCTGTGGATGGTTCTTCGGGGAATGACCTGATTTCTTATCATACGTACTTTACAAACGTCTTTGGAAATCCTGAGAAAGCTTATCACAACTCTGTGGGTGTCAGAGGGGCTTCAGTATACATTCTCGGGACTGCACGTCTTGTTATCTCCAGACTTTTGCCATGGAAGGAGCGGGTTGATGTTTTAAGGAGAGGAGGTGACTGGATGGGTGCTTTTAACATGGCAATGTCACTTTTTAATGGGCAAGCTCATGGGGTTGTTGACCTCCCCAAAACTGTGGACGCCATAAGGGAAGCAATAGCACCCAGTTTAGCAGAGTTGCTACTTTCCTATGTAGATGAAGTATTTTCTTATATCACAATAGCATTTTCCAGTCAGATTGAAAAGAATGGAGTAACTAATGAGCCAAGCAGTGGAACCAATAATGTCAATTTAGAGATAGAAGAACAATACAATCGTGTTGGTGGTGTTGCCGTTGAATTCTGTGTTCATATTAACAGGATGGATTTGCTCTTCGATGAGATATTTTCCAGATTTGTGGCTGTACAACAAAGAGATACATTTTTGGAGCTTTTGGAGCCTTATATTCTAAAGGATATGCTTGGATCGCTTCCTCCAGAGATTATGCAAGCTCTGGTAGAACATTATAGTAGGAAAGGATGGCTACAAAGAATTGAGCAGTGTGTTCTTCACATGGATATTTCTTCCTTAGATTTCAATCAGGTTGTCAGAATTTGCCGTGAGCATGGGCTTTATGGGGCCTTACTCTATCTTTTCAACAAAGGGTTGGATGATTTCAGGTCACCTCTGGAGGAGCTTTTGATTGTCTTCCGGAACAGTGAGAGACAAAGGTCTACAGCCATTGGGTACCGAATGCTTGTTTATCTAAAGTACTGCTTTCTTGGTTTGGCTTTTCCACCAGGGCATGGAACCCTGGTTCCTACGCGCTTACCATCCCTTAGGACTGAGTTGATTCAGTTTCTACTGGAGAAATCAAACTCCCACGAATCTAGTAGATGTGTATCATCTCCACGGATTTACTTGAACCTCTACCATCTGCTAGAGTTGGATACTGAAGCCACTTTAGATGTCCTAAGATATGCATTTGCAGAAAGTGAAATGGAAGATCATGAGACCCTTTTGCTGGAGTCTGGTGAAGTAAGTTTAGAGTCCAAGACCGATGGCAGTATCCCGGAAGATAGATGTAACGATATGTTGATCCAGAATGTGATAGAGGCCCTAGTTCATATTATTGATGGGGGCTTTAGTCAACTTGATGAATCTGGGGATCTAGATGATTCAAAATCAGATAAAAAGTGGCCCTCTAAGGAAGATACGAGTCATCTATTTGAGTTTGTTGCATATTATGCAGCACGTGGAAGAGCTAGTATTCCCAAGAGCGTATTGGCACAGATTTTAGACTACGTAACATCAGATCACATTCTTCCGACTTATAACATGTCTCCTAAAATGAGAGAGAACCAATTTCTAAACCTTCTGCAAGCCGTACCGGTGACTGATTGGGATGTAGCTTATGTATCTCAGCTTTGTGAGAAGGCACATTTTTATCAGGTCTGTGGCTATATTCATACTATTGGTCGACGGTACGTTGCTGCTTTAGAAAGCTACATGAAAGAGGCAGAGGAACCCATACATTCGTTTTGCTATGTGAACAAGATGCTTTCGCAGTTGAATGGGAATGAATTCACTGCTTTTCAATCTGCAGTAATTGATAGGATTCCTGAGCTCCTTGAATTGAGCAGAGAGGGAACATTCTTCCTGATCATTGATAATCTGAAAGACAACATCACACGCATTCAAGAGCAGCTCCATTCTCATCCAAGAAGCATGTTCCTTTATCTCAAGACTGTCATCGAGGTTCACTTGTCTGGGAGTCTTGATTTTTCTCGTCTAAGAAAACATGAAGCGGTGGACAGTTTGGGTGAAAACACTAGAAGGAATATACCCAAAGAGGCTGAGCTTTATTTGGAAGGACTTAATGGCTTTCCCAAATTCATTCAAGATAATCCAGTCAATGTGACTGATGACATGATTGAGCTTTACTTGGAGCTATTATGCAAGTATGAACCGAAGTCAGTCTTGAGATTCCTCGAAACGTTTGACAACTACAGGGTGGAACACTGTCTACGCCTCTGCCAGAAATATGGAATTGCAGATGCAGCAGCATTTCTCTTGGAGAGGGTCGGTGATGCAGCAAGTGCTTTGTCACTTACACTCTCTGGACTCAGTGAAAATTTTGTCGCGCTTGAAAACGCAGTGGCTTGCCTAATCTCAGAACTAAAGTTGGGTGCTAGCGAAGTAGCCACCTTGGAACAATCCAACAGCGCTCTAAAGTTGAAGGAGGTAAATGACATACAAGGTGTTCTGCAAGCCTGTATAGGATTGTGCCAACGGAACACTCCTCGCCTTAATCCTGAAGAGTCAGAGATTCTTTGGTTTCGCTTTCTTGACACTTTCTCAGAGCCTTTGATGGATTCATATCGGGAACCAAGGACTGTCGATGAAATAAACAAAGGCACTTCCAGTGTTAAATCATTGGAACTGTGTGTAGATGAAGCAGTTGACACAATCAAGTGGAGGATTCCGCGATCTAATGTCGCCGGTACACATATCCTGAGGAAGCTCATGTCTCAGTTTATCAAAGAGATTGTTGAAGGAATGATAGGATACGTTCGTCTTCCAACAATCATGTCAAAACTTCTTTCTGACAACGGTACTCAAGAGTTTGGTGATTTCAAGCTTACAATACTGGGAATGCTTGGAACATATGGCTTCGAGCGGAGAATACTGGATACTGCAAAGTCTTTAATCGAAGAGGATACATTCTACACCATGAGTTTACTCAAGAAAGGTGCTTCTCAAGGTTACGCACCCAGAAGTTTGCTTTGCTGTATATGCAATTGTCCTCTCACCAAGACGTTCTCTACTCTTCGTGTACGTGTTTTCAACTGTGGCCACGCAACGCATCTGCAATGTGAAGTGTCGGAGAGTGAAACATCTTCATCAGGTTGTCCTGTTTGTATGACCAAGAAGACCACACAGAGTTCATCAAAAGGTAAATCATTCTACTTAGACTATGGACTGATAAGCACAGTTTCTTCAAACACCGGCACTTCACAACGCGCTTCGCCTTACTCTTATGAGAATGAAATGATCGATCATTCTCATAGCCAGCAAATATCACGATTTGAAATGCTAACCAAGCTACAGAAAGATCAGAGACTGGTACAGATAGAAAGCTTGCCTCGATTAAAGCTGTCACCTCCTGCTGTGTACCACGAGAAAGTGAGCAGAGTCTCGGGTTTTACACCGGGAGAGAGCAGCGGTAAAGACTCGAAACCATCCCAAAGTGGACTGATGAGTAAGAAAACGAAAGCAAAAGGATCTATCTTTCGGCCAAGACTTGCTTTTGGAAAGGAGAAGACGAGCAGAAGATAA

Protein:   MKNSHVELDLDSFLVSDSDSEPDSDPSSVPHRTIDEILNASSSSSPSSSPPPSPPLVRDQLNRRNQNAAARPQSEIHRVTDPARRNPAPSASLRQLPLPSLFAGVRSNVKPGAALAAAVAASRLVPTPHAAIIKSRRASSELLLGGAAGESSSNQDEDDHEVLSSNGDSAGIENPSFDRESRLEDEDDGVGLSSQDKESQVMEVQASDIDDYEKNSKPDLVTASSGVDVEEEVSSEQEGMAATEAGDADTMFVALSADSLESQHLNDSDDVKVRNDEESSAGDVKNDDSDFKEEEEGGDDALVPDDGSSVSGISELVEERIEEMEKERMSKREKLKSRSFRKQLVLAEEFEKKQAYTGLHWEEGAAAQPMRLEGVKIGSTNLGYFDVDASNIVSRTISSQAFKRDHGSPQVLAVHLNFIAVGTSKGVIVVVPSKYSSDTADQMESKMIWLGLQGERSHSPVTSVCFNQQGGLLLAGYGDGHVTVWDVQRASAAKVITEHTAPVVYAFFLGRDSQGSRIFKVITSDNKGVVFKHTFSWTLLLNMYTVKTQCLLDGQKNGMVLSASPLPDEYFGSSLASSKAGNTATPSSSISSMVGGVVGVDSSWKLFNEDASAVEEGVVVFVTYQTVLVVKLIPDLEVYAQLPRPEGVREGSMPYTAWKCSMENSSKEAKDRVSFLAIAWDRRVQVAKLVKSKLKECAKWSLDSAAIGVVWLDDQLLVIPTVTGHLYLFTRDGVVIHQTSFSVDGSSGNDLISYHTYFTNVFGNPEKAYHNSVGVRGASVYILGTARLVISRLLPWKERVDVLRRGGDWMGAFNMAMSLFNGQAHGVVDLPKTVDAIREAIAPSLAELLLSYVDEVFSYITIAFSSQIEKNGVTNEPSSGTNNVNLEIEEQYNRVGGVAVEFCVHINRMDLLFDEIFSRFVAVQQRDTFLELLEPYILKDMLGSLPPEIMQALVEHYSRKGWLQRIEQCVLHMDISSLDFNQVVRICREHGLYGALLYLFNKGLDDFRSPLEELLIVFRNSERQRSTAIGYRMLVYLKYCFLGLAFPPGHGTLVPTRLPSLRTELIQFLLEKSNSHESSRCVSSPRIYLNLYHLLELDTEATLDVLRYAFAESEMEDHETLLLESGEVSLESKTDGSIPEDRCNDMLIQNVIEALVHIIDGGFSQLDESGDLDDSKSDKKWPSKEDTSHLFEFVAYYAARGRASIPKSVLAQILDYVTSDHILPTYNMSPKMRENQFLNLLQAVPVTDWDVAYVSQLCEKAHFYQVCGYIHTIGRRYVAALESYMKEAEEPIHSFCYVNKMLSQLNGNEFTAFQSAVIDRIPELLELSREGTFFLIIDNLKDNITRIQEQLHSHPRSMFLYLKTVIEVHLSGSLDFSRLRKHEAVDSLGENTRRNIPKEAELYLEGLNGFPKFIQDNPVNVTDDMIELYLELLCKYEPKSVLRFLETFDNYRVEHCLRLCQKYGIADAAAFLLERVGDAASALSLTLSGLSENFVALENAVACLISELKLGASEVATLEQSNSALKLKEVNDIQGVLQACIGLCQRNTPRLNPEESEILWFRFLDTFSEPLMDSYREPRTVDEINKGTSSVKSLELCVDEAVDTIKWRIPRSNVAGTHILRKLMSQFIKEIVEGMIGYVRLPTIMSKLLSDNGTQEFGDFKLTILGMLGTYGFERRILDTAKSLIEEDTFYTMSLLKKGASQGYAPRSLLCCICNCPLTKTFSTLRVRVFNCGHATHLQCEVSESETSSSGCPVCMTKKTTQSSSKGKSFYLDYGLISTVSSNTGTSQRASPYSYENEMIDHSHSQQISRFEMLTKLQKDQRLVQIESLPRLKLSPPAVYHEKVSRVSGFTPGESSGKDSKPSQSGLMSKKTKAKGSIFRPRLAFGKEKTSRR